"""
Implementing logistic regression for classification problem
Helpful resources:
Coursera ML course
https://medium.com/@martinpella/logistic-regression-from-scratch-in-python-124c5636b8ac
"""
import numpy as np
from matplotlib import pyplot as plt
from sklearn import datasets
def sigmoid_function(z):
return 1 / (1 + np.exp(-z))
def cost_function(h, y):
return (-y * np.log(h) - (1 - y) * np.log(1 - h)).mean()
def log_likelihood(X, Y, weights):
scores = np.dot(X, weights)
return np.sum(Y * scores - np.log(1 + np.exp(scores)))
def logistic_reg(alpha, X, y, max_iterations=70000):
theta = np.zeros(X.shape[1])
for iterations in range(max_iterations):
z = np.dot(X, theta)
h = sigmoid_function(z)
gradient = np.dot(X.T, h - y) / y.size
theta = theta - alpha * gradient
z = np.dot(X, theta)
h = sigmoid_function(z)
J = cost_function(h, y)
if iterations % 100 == 0:
print(f"loss: {J} \t")
return theta
if __name__ == "__main__":
iris = datasets.load_iris()
X = iris.data[:, :2]
y = (iris.target != 0) * 1
alpha = 0.1
theta = logistic_reg(alpha, X, y, max_iterations=70000)
print("theta: ", theta)
def predict_prob(X):
return sigmoid_function(
np.dot(X, theta)
)
plt.figure(figsize=(10, 6))
plt.scatter(X[y == 0][:, 0], X[y == 0][:, 1], color="b", label="0")
plt.scatter(X[y == 1][:, 0], X[y == 1][:, 1], color="r", label="1")
(x1_min, x1_max) = (X[:, 0].min(), X[:, 0].max())
(x2_min, x2_max) = (X[:, 1].min(), X[:, 1].max())
(xx1, xx2) = np.meshgrid(np.linspace(x1_min, x1_max), np.linspace(x2_min, x2_max))
grid = np.c_[xx1.ravel(), xx2.ravel()]
probs = predict_prob(grid).reshape(xx1.shape)
plt.contour(xx1, xx2, probs, [0.5], linewidths=1, colors="black")
plt.legend()
plt.show()